Resources · Data sources

Source metadata,
before source claims.

Dataset manifests record version, layer, source, status, provenance, and declared consumers without bundling scientific source data into the site.

Generated dataset catalog

Registered source contracts.

A planned record is not a downloaded, harmonized, or analysis-ready dataset.

CURATED

DEPMAP_CRISPR_GENE_EFFECT

DEPMAP_CRISPR_GENE_EFFECT

Planned harmonized CRISPR gene-effect dataset; release and semantics are not yet locked.

Source
Cancer Dependency Map
Version
pending-source-lock
Status
planned
Provenance
datasets/provenance/DEPMAP_CRISPR_GENE_EFFECT.yaml
RAW

GDC_TCGA_BRCA_CASE_METADATA

GDC_TCGA_BRCA_CASE_METADATA

Planned immutable TCGA-BRCA case/sample metadata source snapshot required for deterministic research-cohort construction; no source snapshot is locked. Curated linkages receive a separate dataset identity.

Source
NCI Genomic Data Commons
Version
pending-source-lock
Status
planned
Provenance
datasets/provenance/GDC_TCGA_BRCA_CASE_METADATA.yaml
RAW

GDC_TCGA_BRCA_RNA

GDC_TCGA_BRCA_RNA

Planned immutable TCGA-BRCA STAR Counts source dataset; the GDC source release and file inventory are not yet locked. Curated expression receives a separate dataset identity.

Source
NCI Genomic Data Commons
Version
pending-source-lock
Status
planned
Provenance
datasets/provenance/GDC_TCGA_BRCA_RNA.yaml
RAW

GDC_TCGA_BRCA_SOMATIC_MUTATIONS

GDC_TCGA_BRCA_SOMATIC_MUTATIONS

Planned immutable open TCGA-BRCA masked somatic mutation MAF source dataset; the GDC source release and file inventory are not yet locked. Curated mutation data receives a separate dataset identity.

Source
NCI Genomic Data Commons
Version
pending-source-lock
Status
planned
Provenance
datasets/provenance/GDC_TCGA_BRCA_SOMATIC_MUTATIONS.yaml
CURATED

GDSC_DRUG_RESPONSE

GDSC_DRUG_RESPONSE

Planned harmonized GDSC response dataset; licensed release and response semantics are unresolved.

Source
Genomics of Drug Sensitivity in Cancer
Version
pending-source-lock
Status
planned
Provenance
datasets/provenance/GDSC_DRUG_RESPONSE.yaml
CURATED

PDC_PROTEOMICS

PDC_PROTEOMICS

Planned harmonized proteomics dataset; study, source release, and processing are unresolved.

Source
NCI Proteomic Data Commons
Version
pending-source-lock
Status
planned
Provenance
datasets/provenance/PDC_PROTEOMICS.yaml
CURATED

PRISM_DRUG_RESPONSE

PRISM_DRUG_RESPONSE

Planned harmonized PRISM response dataset; release, dose, and viability semantics are unresolved.

Source
PRISM Repurposing
Version
pending-source-lock
Status
planned
Provenance
datasets/provenance/PRISM_DRUG_RESPONSE.yaml

Research data safety

Metadata, not patient data.

No patient identifiers, protected sample-level data, credentials, or large source files belong in this repository.